Find Forward related Network By Genes

findForwardRelatedNetworkByGenes(
  networks,
  target_gene_list = c(),
  regulationType = NULL,
  target_type = NULL,
  maxDeep = 1,
  next_level_mix_type = FALSE
)

Arguments

networks

The Fundamental Boolean Network

target_gene_list

The target genes

regulationType

The type of regulation either in 1 (Up regulation) or 0 (down regulation)

target_type

The boolean type of target genes either in 1 (Activation) or 0 (Inhibition)

maxDeep

The maximum layous that need to be drilled down.

next_level_mix_type

If TRUE, the next level will contain all type of connections.