R/graph_FBN.R
FBNNetwork.Graph.Rd
Executing a list of processes in parallel with decreasing list
FBNNetwork.Graph(
fbnNetwork,
type = "static",
timeseriesMatrix = NULL,
fromTimePoint = 1,
toTimePoint = 5,
networkobject = NULL
)
A FBN Network object
A type of object and its value is type=static | dynamic | staticSlice
A sample timeseries matrix
The time point at the beginning
The time point at the end
An object created by the funciton
ConvertToNetworkGraphicObject
.
No return
data('yeastTimeSeries')
network <- generateFBMNetwork(yeastTimeSeries)
network
#> Fundamental Boolean Network with 3 genes
#> Genes involved:
#> Fkh2, Swi5, Clb1
#>
#> Networks:
#> Multiple Transition Functions for Fkh2 with decay value = 1:
#> Fkh2_1_Activator: Fkh2 = Fkh2 (Confidence: 1, TimeStep: 1)
#> Fkh2_2_Activator: Fkh2 = Clb1 (Confidence: 1, TimeStep: 1)
#>
#> Multiple Transition Functions for Swi5 with decay value = 1:
#> Swi5_1_Activator: Swi5 = Fkh2 (Confidence: 1, TimeStep: 1)
#> Swi5_2_Activator: Swi5 = Clb1 (Confidence: 1, TimeStep: 1)
#>
#> Multiple Transition Functions for Clb1 with decay value = 1:
#> Clb1_1_Activator: Clb1 = Fkh2 (Confidence: 1, TimeStep: 1)
#> Clb1_2_Activator: Clb1 = Clb1 (Confidence: 1, TimeStep: 1)
## draw the general graph
FBNNetwork.Graph(network)